Publications

Selected LeedsOmics-related publications

Moore JB, Hart K, Hancock N, Wright C, Norris S, Naimimohasses S, Bredin C. 2020. Development and relative validation of a short food frequency questionnaire for assessing dietary intakes of non-alcoholic fatty liver disease patients. European Journal of Nutrition. 571-580 59

Vuong K, Armstrong BK, Drummond M, Hopper JL, Barrett JH, Davies JR, Bishop DT, Newton-Bishop J, Aitken JF, Giles GG, Schmid H, Jenkins MA, Mann GJ, McGeechan K, Cust AE. 2020. Development and external validation study of a melanoma risk prediction model incorporating clinically assessed naevi and solar lentigines. The British Journal of Dermatology. 182(5), pp. 1262-1268

Wilson SC, Crawford I, Trukhanova I, Dmitrieva L, Goodman SJ. 2020. Estimating risk to ice-breeding pinnipeds from shipping in Arctic and sub-Arctic seas. Marine Policy. 111

Thirkell TJ, Pastok D, Field KJ. 2020. Carbon for nutrient exchange between arbuscular mycorrhizal fungi and wheat varies according to cultivar and changes in atmospheric carbon dioxide concentration. Global Change Biology. 26(3), pp. 1725-1738

Vasudev NS, Hutchinson M, Trainor S, Ferguson R, Bhattarai S, Adeyoju A, Cartledge J, Kimuli M, Datta S, Hanbury D, Hrouda D, Oades G, Patel P, Soomro N, Stewart GD, Sullivan M, Webster J, Messenger M, Selby PJ, Banks RE. 2020. UK Multicenter Prospective Evaluation of the Leibovich Score in Localized Renal Cell Carcinoma: Performance has Altered Over Time. Urology. 136, pp. 162-168

Avitabile M, Succoio M, Testori A, Cardinale A, Vaksman Z, Lasorsa VA, Cantalupo S, Esposito M, Cimmino F, Montella A, Formicola D, Koster J, Andreotti V, Ghiorzo P, Romano MF, Staibano S, Scalvenzi M, Ayala F, Hakonarson H, Corrias MV, Devoto M, Law MH, Iles MM, Brown K, Diskin S, Zambrano N, Iolascon A, Capasso M. 2020. Neural crest-derived tumor neuroblastoma and melanoma share 1p13.2 as susceptibility locus that shows a long-range interaction with the SLC16A1 gene. Carcinogenesis. 41(3), pp. 284-295

Fazal A, Thankachan D, Harris E, Seipke R. 2020. A chromatogram-simplified Streptomyces albus host for heterologous production of natural products. Antonie van Leeuwenhoek. 113, pp. 511-520

Close HJ, Stead LF, Nsengimana J, Reilly KA, Droop A, Wurdak H, Mathew RK, Corns R, Newton‐Bishop J, Melcher AA, Short SC, Cook GP, Wilson EB. 2020. Expression profiling of single cells and patient cohorts identifies multiple immunosuppressive pathways and an altered NK cell phenotype in glioblastoma. Clinical & Experimental Immunology. 200(1), pp. 33-44

Al Amri WS, Allinson LM, Baxter DE, Bell SM, Hanby AM, Jones SJ, Shaaban AM, Stead LF, Verghese ET, Hughes TA. 2020. Genomic and expression analyses define MUC17 and PCNX1 as predictors of chemotherapy response in breast cancer. Molecular Cancer Therapeutics. 19(3), pp. 945-955

Elliott AJ, Daniell TJ, Cameron DD, Field KJ. 2020. A commercial arbuscular mycorrhizal inoculum increases root colonization across wheat cultivars but does not increase assimilation of mycorrhiza‐acquired nutrients. Plants, People, Planet.

Dube U, Ibanez L, Budde JP, Benitez BA, Davis AA, Harari O, Iles MM, Law MH, Brown KM, 23andMe Research Team, Melanoma-Meta-analysis Consortium, Cruchaga C. 2020. Overlapping genetic architecture between Parkinson disease and melanoma. Acta Neuropathologica. 139(2), pp. 347-364

Cuvertino S, Hartill V, Colyer A, Garner T, Nair N, Al-Gazali L, Canham N, Faundes V, Flinter F, Hertecant J, Holder-Espinasse M, Jackson B, Lynch SA, Nadat F, Narasimhan VM, Peckham M, Sellers R, Seri M, Montanari F, Southgate L, Squeo GM, Trembath R, van Heel D, Venuto S, Weisberg D, Stals K, Ellard S, Genomics England Research Consortium, Barton A, Kimber SJ, Sheridan E, Merla G, Stevens A, Johnson CA, Banka S. 2020. A restricted spectrum of missense KMT2D variants cause a multiple malformations disorder distinct from Kabuki syndrome. Genetics in Medicine. 22(5), pp. 867-877

Van Eeckhoven J, Duncan EJ. 2020. Mating status and the evolution of eusociality: Oogenesis is independent of mating status in the solitary bee Osmia bicornis. Journal of Insect Physiology. 121

Moura IB, Normington C, Ewin D, Clark E, Wilcox MH, Buckley AM, Chilton CH. 2020. Method comparison for the direct enumeration of bacterial species using a chemostat model of the human colon. BMC Microbiology. 20

Moore JB, Sutton EH, Hancock N. 2020. Sugar Reduction in Yogurt Products Sold in the UK between 2016 and 2019. Nutrients. 12.1

Bryden SR, Pingen M, Lefteri DA, Miltenburg J, Delang L, Jacobs S, Abdelnabi R, Neyts J, Pondeville E, Major J, Müller M, Khalid H, Tuplin A, Varjak M, Merits A, Edgar J, Graham GJ, Shams K, McKimmie CS. 2020. Pan-viral protection against arboviruses by activating skin macrophages at the inoculation site. Science Translational Medicine. 12(527)

Storti CB, de Oliveira RA, de Carvalho M, Hasimoto EN, Cataneo DC, Cataneo AJM, De Faveri J, Vasconcelos EJR, dos Reis PP, Cano MIN. 2020. Telomere-associated genes and telomeric lncRNAs are biomarker candidates in lung squamous cell carcinoma (LUSC). Experimental and Molecular Pathology. 112

van Lieshout SHJ, Froy H, Schroeder J, Burke T, Simons MJP, Dugdale HL. 2020. Slicing: a sustainable approach to structuring samples for analysis in long-term studies. Methods in Ecology and Evolution. 11(3), pp. 418-430

Field KJ, Daniell T, Johnson D, Helgason T. 2020. Mycorrhizas for a changing world: Sustainability, conservation, and society. Plants, People, Planet. 2(2), pp. 98-103

Doherty CPA, Ulamec SM, Maya-Martinez R, Good SC, Makepeace J, Khan GN, Van Oosten-Hawle P, Radford SE, Brockwell DJ. 2020. A short motif in the N-terminal region of α-synuclein is critical for both aggregation and function. Nature Structural & Molecular Biology. 27, pp. 249-259

Banks R. 2020. Prognostic Imaging biomarkers for diabetic kidney Disease (iBEAt): Study protocol. medRxIV.

Chilton CH, Crowther GS, de Gunzburg J, Andremont A, Wilcox MH. 2020. Investigation of the effect of the adsorbent DAV131A on the propensity of moxifloxacin to induce simulated Clostridioides (Clostridium) difficile infection (CDI) in an in vitro human gut model. Journal of Antimicrobial Chemotherapy.

Thorne J, Moore JB, Corfe BM. 2020. Nutrition and Cancer: Evidence Gaps and Opportunities for Improving Knowledge. Proceedings of the Nutrition Society.

The ICGC/TCGA Pan-Cancer Analysis of Whole Genomes. 2020. Pan-cancer analysis of whole genomes. Nature. 578(7793), pp. 82-93

Vasudev NS, Selby PJ, Banks RE. 2020. AUTHOR REPLY. Urology. 136, pp. 168-168

Tsagakis I, Douka K, Birds I, Aspden JL. 2020. Long non‐coding RNAs in development and disease: Conservation to mechanisms. Journal of Pathology.

Duncan EJ, Leask MP, Dearden PK. 2020. Genome architecture facilitates phenotypic plasticity in the honeybee (Apis mellifera). Molecular Biology and Evolution.

Charters MD, Sait SM, Field KJ. 2020. Aphid herbivory drives asymmetry in carbon for nutrient exchange between plants and an arbuscular mycorrhizal fungus. Current Biology.

Struve N, Binder ZA, Stead LF, Brend T, Bagley SJ, Faulkner C, Ott L, Müller-Goebel J, Weik A-S, Hoffer K, Krug L, Rieckmann T, Bußmann L, Henze M, Morrissette JJD, Kurian KM, Schüller U, Petersen C, Rothkamm K, O´ Rourke DM, Short SC, Kriegs M. 2020. EGFRvIII upregulates DNA mismatch repair resulting in increased temozolomide sensitivity of MGMT promoter methylated glioblastoma. Oncogene. 39(15), pp. 3041-3055

Dusingize JC, Olsen CM, An J, Pandeya N, Law MH, Thompson BS, Goldstein AM, Iles MM, Webb PM, Neale RE, Ong J-S, MacGregor S, Whiteman DC. 2020. Body mass index and height and risk of cutaneous melanoma: Mendelian randomization analyses. International Journal of Epidemiology.

Rombi F, Bayliss R, Tuplin A, Yeoh S. 2020. The journey of Zika to the developing brain. Molecular Biology Reports.

Uh H-W, Klaric L, Ugrina I, Lauc G, Smilde AK, Houwing-Duistermaat J. 2020. Choosing proper normalization is essential for discovery of sparse glycan biomarkers. Molecular Omics.

Rimington WR, Duckett JG, Field KJ, Bidartondo MI, Pressel S. 2020. The distribution and evolution of fungal symbioses in ancient lineages of land plants. Mycorrhiza. 30(1), pp. 23-49

Li F-W, Nishiyama T, Waller M, Frangedakis E, Keller J, Li Z, Fernandez-Pozo N, Barker MS, Bennett T, Blázquez MA, Cheng S, Cuming AC, de Vries J, de Vries S, Delaux P-M, Diop IS, Harrison CJ, Hauser D, Hernández-García J, Kirbis A, Meeks JC, Monte I, Mutte SK, Neubauer A, Quandt D, Robison T, Shimamura M, Rensing SA, Villarreal JC, Weijers D, Wicke S, Wong GK-S, Sakakibara K, Szövényi P. 2020. Anthoceros genomes illuminate the origin of land plants and the unique biology of hornworts. Nature Plants. 6(3), pp. 259-272

Jones L, Chen Y, van Oosten-Hawle P. 2020. Redefining proteostasis transcription factors in organismal stress responses, development, metabolism and health. Biological Chemistry.

Hornigold N, Dunn KR, Craven RA, Zougman A, Trainor S, Shreeve R, Brown J, Sewell H, Shires M, Knowles M, Fukuwatari T, Maher ER, Burns J, Bhattarai S, Menon M, Brazma A, Scelo G, Feulner L, Riazalhosseini Y, Lathrop M, Harris A, Selby PJ, Selby PJ, Banks RE, Vasudev NS. 2020. Dysregulation at multiple points of the kynurenine pathway is a ubiquitous feature of renal cancer: implications for tumour immune evasion. British Journal of Cancer.

Bilyk B, Kim S, Fazal A, Baker TA, Seipke RF. 2020. Regulation of Antimycin Biosynthesis Is Controlled by the ClpXP Protease. mSphere. 5(2)

Dube U, Ibanez L, Budde JP, Benitez BA, Davis AA, Harari O, Iles MM, Law MH, Brown KM, Cruchaga C. 2020. Correction to: Overlapping genetic architecture between Parkinson disease and melanoma. Acta Neuropathologica. 139(5), pp. 963-963

Mukherji S, Ghosh A, Bhattacharyya C, Mallick I, Bhattacharyya A, Mitra S, Ghosh A. 2020. Molecular and culture-based surveys of metabolically active hydrocarbon-degrading archaeal communities in Sundarban mangrove sediments. Ecotoxicology and Environmental Safety. 195

Kaymaz Ö, Alqahtani K, Wood HM, Gusnanto A. 2020. Prediction of tumour pathological subtype from genomic profile using sparse logistic regression with random effects. Journal of Applied Statistics.

Vasudev NS, Wilson M, Stewart GD, Adeyoju A, Cartledge J, Kimuli M, Datta S, Hanbury D, Hrouda D, Oades G, Patel P, Soomro N, Sullivan M, Webster J, Selby PJ, Banks RE. 2020. Challenges of early renal cancer detection: symptom patterns and incidental diagnosis rate in a multicentre prospective UK cohort of patients presenting with suspected renal cancer. BMJ Open. 10(5)

Haigh J, Williamson DJ, Poole E, Guo Y, Zhou D, Webb ME, Deuchars S, Deuchars J, Turnbull WB. 2020. A versatile cholera toxin conjugate for neuronal targeting and tracing. Chemical Communications.

Malo Estepa I, Tinning H, Vasconcelos EJR, Fernandez-Fuertes B, Sánchez JM, Burns GW, Spencer TE, Lonergan P, Forde N. 2020. Protein Synthesis by Day 16 Bovine Conceptuses during the Time of Maternal Recognition of Pregnancy. International Journal of Molecular Sciences. 21(8)

Landi MT, Bishop DT, MacGregor S, Machiela MJ, Stratigos AJ, Ghiorzo P, Brossard M, Calista D, Choi J, Fargnoli MC, Zhang T, Rodolfo M, Trower AJ, Menin C, Martinez J, Hadjisavvas A, Song L, Stefanaki I, Scolyer R, Yang R, Goldstein AM, Potrony M, Kypreou KP, Pastorino L, Queirolo P, Pellegrini C, Cattaneo L, Zawistowski M, Gimenez-Xavier P, Rodriguez A, Elefanti L, Manoukian S, Rivoltini L, Smith BH, Loizidou MA, Del Regno L, Massi D, Mandala M, Khosrotehrani K, Akslen LA, Amos CI, Andresen PA, Avril M-F, Azizi E, Soyer HP, Bataille V, Dalmasso B, Bowdler LM, Burdon KP, Chen WV, Codd V, Craig JE, Dębniak T, Falchi M, Fang S, Friedman E, Simi S, Galan P, Garcia-Casado Z, Gillanders EM, Gordon S, Green A, Gruis NA, Hansson J, Harland M, Harris J, Helsing P, Henders A, Hočevar M, Höiom V, Hunter D, Ingvar C, Kumar R, Lang J, Lathrop GM, Lee JE, Li X, Lubiński J, Mackie RM, Malt M, Malvehy J, McAloney K, Mohamdi H, Molven A, Moses EK, Neale RE, Novaković S, Nyholt DR, Olsson H, Orr N, Fritsche LG, Puig-Butille JA, Qureshi AA, Radford-Smith GL, Randerson-Moor J, Requena C, Rowe C, Samani NJ, Sanna M, Schadendorf D, and 53 other authors. 2020. Genome-wide association meta-analyses combining multiple risk phenotypes provide insights into the genetic architecture of cutaneous melanoma susceptibility. Nature Genetics. 52(5), pp. 494-504

Zougman A, Wilson JP, Banks RE. 2020. A simple serum depletion method for proteomics analysis. BioTechniques.

Dobson SJ, Mankouri J, Whitehouse A. 2020. Identification of Potassium and Calcium Channel Inhibitors as Modulators of Polyomavirus Endosomal Trafficking. Antiviral Research.

Elpidorou M, Best S, Poulter JA, Hartill VL, Hobson E, Sheridan EG, Johnson CA. 2020. A novel loss-of-function mutation in HERC2 is associated with severe developmental delay and paediatric lethality. Journal of Medical Genetics.

Seligmann JF, Elliott F, Richman S, Hemmings G, Brown S, Jacobs B, Williams C, Tejpar S, Barrett JH, Quirke P, Seymour M. 2020. Clinical and molecular characteristics and treatment outcomes of advanced right-colon, left-colon and rectal cancers: data from 1180 patients in a phase III trial of panitumumab with an extended biomarker panel.. Annals of Oncology.

Morgan EL, Patterson MR, Ryder EL, Lee SY, Wasson CW, Harper KL, Li Y, Griffin S, Blair GE, Whitehouse A, Macdonald A. 2020. MicroRNA-18a targeting of the STK4/MST1 tumour suppressor is necessary for transformation in HPV positive cervical cancer. PLoS Pathogens.

Oeyen JP, Baa-Puyoulet P, Benoit JB, Beukeboom LW, Bornberg-Bauer E, Buttstedt A, Calevro F, Cash EI, Chao H, Charles H, Chen M-JM, Childers C, Cridge AG, Dearden P, Dinh H, Doddapaneni HV, Dolan A, Donath A, Dowling D, Dugan S, Duncan E, Elpidina EN, Friedrich M, Geuverink E, Gibson JD, Grath S, Grimmelikhuijzen CJP, Große-Wilde E, Gudobba C, Han Y, Hansson BS, Hauser F, Hughes DST, Ioannidis P, Jacquin-Joly E, Jennings EC, Jones JW, Klasberg S, Lee SL, Lesný P, Lovegrove M, Martin S, Martynov AG, Mayer C, Montagné N, Moris VC, Munoz-Torres M, Murali SC, Muzny DM, Oppert B, Parisot N, Pauli T, Peters RS, Petersen M, Pick C, Persyn E, Podsiadlowski L, Poelchau MF, Provataris P, Qu J, Reijnders MJMF, Marcus von Reumont B, Rosendale AJ, Simao FA, Skelly J, Sotiropoulos AG, Stahl AL, Sumitani M, Szuter EM, Tidswell O, Tsitlakidis E, Vedder L, Waterhouse RM, Werren JH, Wilbrandt J, Worley KC, Yamamoto DS, van de Zande L, Zdobnov EM, Ziesmann T, Gibbs RA, Richards S, Hatakeyama M, Misof B, Niehuis O. 2020. Sawfly genomes reveal evolutionary acquisitions that fostered the mega-radiation of parasitoid and eusocial Hymenoptera. Genome Biology and Evolution.

Patraquim P, Mumtaz MAS, Pueyo JI, Aspden JL, Couso J-P. 2020. Developmental regulation of canonical and small ORF translation from mRNAs. Genome Biology. 21

Galloway AF, Akhtar J, Marcus SE, Fletcher N, Field K, Knox P. 2020. Cereal root exudates contain highly structurally complex polysaccharides with soil‐binding properties. The Plant Journal.

Miles J, van Oosten-Hawle P. 2020. Tissue-Specific RNAi Tools to Identify Components for Systemic Stress Signaling. Journal of Visualized Experiments. 159

Moore JB. 2020. From personalised nutrition to precision medicine: the rise of consumer genomics and digital health. Proceedings of the Nutrition Society.

Telford A, Taylor CC, Wood HM, Gusnanto A. 2020. Properties and approximate p-value calculation of the Cramer test. Journal of Statistical Computation and Simulation. 90(11), pp. 1965-1981

Choi J, Zhang T, Vu A, Ablain J, Makowski MM, Colli LM, Xu M, Hennessey RC, Yin J, Rothschild H, Gräwe C, Kovacs MA, Funderburk KM, Brossard M, Taylor J, Pasaniuc B, Chari R, Chanock SJ, Hoggart CJ, Demenais F, Barrett JH, Law MH, Iles MM, Yu K, Vermeulen M, Zon LI, Brown KM. 2020. Massively parallel reporter assays of melanoma risk variants identify MX2 as a gene promoting melanoma. Nature Communications. 11(1)

Drechsler Y, Vasconcelos EJR, Griggs LM, Diniz PPPV, Collisson E. 2020. Host Gene Expression of Macrophages in Response to Feline Coronavirus Infection. Cells. 9(6), pp. 1431-1431

Coneys R, Wood IC. 2020. Alzheimer’s disease: the potential of epigenetic treatments and current clinical candidates. Neurodegenerative Disease Management.

van Lieshout SHJ, Badas EP, Mason MWT, Newman C, Buesching CD, Macdonald DW, Dugdale HL. 2020. Social effects on age-related and sex-specific immune cell profiles in a wild mammal. Biology Letters.

Zulyniak M, Fuller H, Iles M. 2020. Investigation of the causal association between long-chain n6 polyunsaturated fatty acid synthesis and risk of type-2 diabetes: a Mendelian randomisation analysis. Lifestyle Genomics.

Sheridan KJ, Duncan EJ, Eaton-Rye JJ, Summerfield TC. 2020. The diversity and distribution of D1 proteins in cyanobacteria. Photosynthesis Research.

Tinning H, Taylor A, Wang D, Constantinides B, Sutton R, Oikonomou G, Velazquez MA, Thompson P, Treumann A, O’Connell MJ, Forde N. 2020. The role of CAPG in molecular communication between the embryo and the uterine endometrium: Is its function conserved in species with different implantation strategies?. FASEB Journal.

Dobson SJ, Anene A, Boyne JR, Mankouri J, Macdonald A, Whitehouse A. 2020. Merkel Cell Polyomavirus Small Tumour Antigen Activates the p38 MAPK Pathway to Enhance Cellular Motility. Biochemical Journal.

Dube U, Ibanez L, Budde JP, Benitez BA, Davis AA, Harari O, Iles MM, Law MH, Brown KM, 23andMe Research Team, Melanoma-Meta-analysis Consortium, Cruchaga C. 2019. Overlapping genetic architecture between Parkinson disease and melanoma. Acta Neuropathologica.

Al Amri WS, Allinson LM, Baxter DE, Bell SM, Hanby AM, Jones SJ, Shaaban AM, Stead LF, Verghese ET, Hughes TA. 2019. Genomic and expression analyses define MUC17 and PCNX1 as predictors of chemotherapy response in breast cancer. Molecular Cancer Therapeutics.

Close HJ, Stead LF, Nsengimana J, Reilly KA, Droop A, Wurdak H, Mathew RK, Corns R, Newton‐Bishop J, Melcher AA, Short SC, Cook GP, Wilson EB. 2019. Expression profiling of single cells and patient cohorts identifies multiple immunosuppressive pathways and an altered NK cell phenotype in glioblastoma. Clinical & Experimental Immunology.

Olsen CM, Pandeya N, Law MH, MacGregor S, Iles MM, Thompson BS, Green AC, Neale RE, Whiteman DC, The QSkin Study. 2019. Does polygenic risk influence associations between sun exposure and melanoma?: a prospective cohort analysis. British Journal of Dermatology.

Zougman A, Wilson JP, Roberts LD, Banks RE. 2019. Detergent-free simultaneous sample preparation method for proteomics and metabolomics. Journal of Proteome Research.

Vijayabaskar MS, Goode DK, Obier N, Lichtinger M, Emmett AML, Abidin FZ, Shar N, Hannah R, Assi SA, Lie-A-Ling M, Gottgens B, Lacaud G, Kouskoff V, Bonifer C, Westhead DR. 2019. Identification of gene specific cis-regulatory elements during differentiation of mouse embryonic stem cells: An integrative approach using high-throughput datasets. PLoS Computational Biology. 15(11)

Lovegrove MR, Dearden PK, Duncan EJ. 2019. Ancestral hymenopteran queen pheromones do not share the broad phylogenetic repressive effects of honeybee queen mandibular pheromone. Journal of Insect Physiology. 119

Garnham JO, Roberts LD, Espino-Gonzalez E, Whitehead A, Swoboda PP, Koshy A, Gierula J, Paton MF, Cubbon RM, Kearney MT, Egginton S, Bowen TS, Witte KK. 2019. Chronic heart failure with diabetes mellitus is characterized by a severe skeletal muscle pathology. Journal of Cachexia, Sarcopenia and Muscle.

Avitabile M, Succoio M, Testori A, Cardinale A, Vaksman Z, Lasorsa VA, Cantalupo S, Esposito M, Cimmino F, Montella A, Formicola D, Koster J, Andreotti V, Ghiorzo P, Romano MF, Staibano S, Scalvenzi M, Ayala F, Hakonarson H, Corrias MV, Devoto M, Law MH, Iles MM, Brown K, Diskin S, Zambrano N, Iolascon A, Capasso M. 2019. Neural crest-derived tumor neuroblastoma and melanoma share 1p13.2 as susceptibility locus that shows a long-range interaction with the SLC16A1 gene. Carcinogenesis.

Buckley HL, Collinson FJ, Ainsworth G, Poad H, Flanagan L, Katona E, Howard HC, Murden G, Banks RE, Brown J, Velikova G, Waddell T, Fife K, Nathan PD, Larkin J, Powles T, Brown SR, Vasudev NS. 2019. PRISM protocol: A randomised phase II trial of nivolumab in combination with alternatively scheduled ipilimumab in first-line treatment of patients with advanced or metastatic renal cell carcinoma. BMC Cancer. 19

Blythe NM, Muraki K, Ludlow MJ, Stylianidis V, Gilbert HTJ, Evans EL, Cuthbertson K, Foster R, Swift J, Li J, Drinkhill MJ, van Nieuwenhoven FA, Porter KE, Beech DJ, Turner NA. 2019. Mechanically activated Piezo1 channels of cardiac fibroblasts stimulate p38 mitogen-activated protein kinase activity and interleukin-6 secretion. Journal of Biological Chemistry. 294(46), pp. 17395-17408

Zhang Z, Thorne JL, Moore JB. 2019. Vitamin D and nonalcoholic fatty liver disease. Current Opinion in Clinical Nutrition and Metabolic Care. 449-458 22.6

Bretherton B, Deuchars J, Deuchars SA. 2019. What impact could transcutaneous vagal nerve stimulation have on an aging population?. Bioelectronics in Medicine. 2(2), pp. 59-61

Barthel FP, Johnson KC, Varn FS, Moskalik AD, Tanner G, Kocakavuk E, Anderson KJ, Abiola O, Aldape K, Alfaro KD, Alpar D, Amin SB, Ashley DM, Bandopadhayay P, Barnholtz-Sloan JS, Beroukhim R, Bock C, Brastianos PK, Brat DJ, Brodbelt AR, Bruns A, Bulsara KR, Chakrabarty A, Chakravarti A, Chuang JH, Claus EB, Cochran EJ, Connelly J, Costello JF, Finocchiaro G, Fletcher MN, French PJ, Gan HK, Gilbert MR, Gould PV, Grimmer MR, Iavarone A, Ismail A, Jenkinson MD, Khasraw M, Kim H, Kouwenhoven MCM, LaViolette PS, Li M, Lichter P, Ligon KL, Lowman AK, Malta TM, Mazor T, McDonald KL, Molinaro AM, Nam DH, Nayyar N, Ng HK, Ngan CY, Niclou SP, Niers JM, Nouchmehr H, Noorbakhsh J, Ormond DR, Park CK, Poisson LM, Rabadan R, Radlwimmer B, Rao G, Reifenberger G, Sa JK, Schuster M, Shaw BL, Short SC, Sillevis Smitt PA, Sloan AE, Smits M, Suzuki H, Tabatabai G, Van Meir EG, Watts C, Weller M, Wesseling P, Westerman BA, Widhalm G, Woehrer A, Alfred Yung WK, Zadeh G, Huse JT, de Groot JF, Stead LF, Verhaak RGW, GLASS Consortium. 2019. Longitudinal Molecular Trajectories of Diffuse Glioma in Adults. Nature. 576, pp. 112-120

Deivasikamani V, Dhayalan S, Abudushalamu Y, Mughal R, Visnagri A, Cuthbertson K, Scragg JL, Munsey TS, Viswambharan H, Muraki K, Foster R, Sivaprasadarao A, Kearney MT, Beech DJ, Sukumar P. 2019. Piezo1 channel activation mimics high glucose as a stimulator of insulin release. Scientific Reports. 9

Beech DJ, Kalli AC. 2019. Force Sensing by Piezo Channels in Cardiovascular Health and Disease. Arteriosclerosis, Thrombosis, and Vascular Biology. 39(11), pp. 2228-2239

One Thousand Plant Transcriptomes Initiative. 2019. One Thousand Plant Transcriptomes and Phylogenomics of Green Plants. Nature. 574, pp. 679-685

Thirkell TJ, Pastok D, Field KJ. 2019. Carbon for nutrient exchange between arbuscular mycorrhizal fungi and wheat varies according to cultivar and changes in atmospheric carbon dioxide concentration. Global Change Biology.

Baquero-Perez B, Antanaviciute A, Yonchev ID, Carr IM, Wilson SA, Whitehouse A. 2019. The Tudor SND1 protein is an m6A RNA reader essential for replication of Kaposi’s sarcoma-associated herpesvirus. eLife. 8

Traylor M, Knevel R, Cui J, Taylor J, Harm-Jan W, Conaghan PG, Cope AP, Curtis C, Emery P, Newhouse S, Patel H, Steer S, Gregersen P, Shadick NA, Weinblatt ME, Van Der Helm-van Mil A, Barrett JH, Morgan AW, Lewis CM, Scott IC. 2019. Genetic associations with radiological damage in rheumatoid arthritis: Meta-analysis of seven genome-wide association studies of 2,775 cases. PLoS ONE. 14(10)

da Silva B, Irving BK, Polson ES, Droop A, Griffiths HBS, Mathew RK, Stead LF, Marrison J, Williams C, Williams J, Short SC, Scarcia M, O’Toole PJ, Allison SJ, Mavria G, Wurdak H. 2019. Chemically induced neurite-like outgrowth reveals a multicellular network function in patient-derived glioblastoma cells. Journal of Cell Science. 132(19)

Rimington WR, Pressel S, Duckett JG, Field KJ, Bidartondo MI. 2019. Evolution and networks in ancient and widespread symbioses between Mucoromycotina and liverworts. Mycorrhiza. 29(6), pp. 551-565

Moore JB, Fielding BA. 2019. Taxing confectionery, biscuits, and cakes to control obesity: May be more effective than a tax on sugary drinks. BMJ: British Medical Journal. 366

Harper KL, McDonnell E, Whitehouse A. 2019. CircRNAs: From anonymity to novel regulators of gene expression in cancer. International Journal of Oncology. 55(6), pp. 1183-1193

Hopkins BR, Sepil I, Thezenas M-L, Craig JF, Miller T, Charles PD, Fischer R, Kessler BM, Bretman A, Pizzari T, Wigby S. 2019. Divergent allocation of sperm and the seminal proteome along a competition gradient in Drosophila melanogaster. Proceedings of the National Academy of Sciences of the United States of America. 116(36), pp. 17925-17933

Garnham JO, Roberts LD, Caspi T, Al-Owais MM, Bullock M, Swoboda PP, Koshy A, Gierula J, Paton MF, Cubbon RM, Kearney MT, Bowen TS, Witte KK. 2019. Divergent skeletal muscle mitochondrial phenotype between male and female patients with chronic heart failure. Journal of Cachexia, Sarcopenia and Muscle.

Ajduk A, Duncan EJ. 2019. Correction to: From genes to environment in shaping of an embryo: understanding embryonic-extraembryonic interactions at the BSDB autumn meeting in Oxford. Development Genes and Evolution.

Müller M, Slivinski N, Todd EJAA, Khalid H, Li R, Karwatka M, Merits A, Mankouri J, Tuplin A. 2019. Chikungunya virus requires cellular chloride channels for efficient genome replication. PLoS Neglected Tropical Diseases. 13(9)

McCartney AM, Hyland EM, Cormican P, Moran RJ, Webb AE, Lee KD, Hernandez-Rodriguez J, Prado-Martinez J, Creevey CJ, Aspden JL, McInerney JO, Marques-Bonet T, O’Connell MJ. 2019. Gene Fusions derived by transcriptional readthrough are Driven by Segmental Duplication in Human. Genome Biology and Evolution. 11(9), pp. 2678-2690

Vuong K, Armstrong BK, Drummond M, Hopper JL, Barrett JH, Davies JR, Bishop DT, Newton-Bishop J, Aitken JF, Giles GG, Schmid H, Jenkins MA, Mann GJ, McGeechan K, Cust AE. 2019. Development and external validation study of a melanoma risk prediction model incorporating clinically assessed naevi and solar lentigines. The British Journal of Dermatology.

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